apollo.gui.detailviewers.sequencealigner.actions
Class CreateExonAction

java.lang.Object
  javax.swing.AbstractAction
      apollo.gui.detailviewers.sequencealigner.actions.CreateExonAction

All Implemented Interfaces:

java.awt.event.ActionListener, java.io.Serializable, java.lang.Cloneable, java.util.EventListener, javax.swing.Action

public class CreateExonAction
extends javax.swing.AbstractAction

An Action class for creating a single base exon within an intron region. NOTE: Will this work in a non intron region? In that case the feature would be null. For now I'll assume it won't, but maybe it should.

See Also:

Serialized Form

Field Summary

Fields inherited from class javax.swing.AbstractAction

changeSupport, enabled

Fields inherited from interface javax.swing.Action

ACCELERATOR_KEY, ACTION_COMMAND_KEY, DEFAULT, LONG_DESCRIPTION, MNEMONIC_KEY, NAME, SHORT_DESCRIPTION, SMALL_ICON

Constructor Summary

CreateExonAction(java.lang.String name, GuiCurationState curationState, AnnotationEditor annotationEditor)
Constructor

Method Summary

void	actionPerformed(java.awt.event.ActionEvent e) Performs the insertion
void	setFeature(SeqFeatureI feature) Sets what feature the exon will be added to
void	setSelectedBasePair(int basepair) Sets the location of the one base exon

Methods inherited from class javax.swing.AbstractAction

addPropertyChangeListener, clone, firePropertyChange, getKeys, getPropertyChangeListeners, getValue, isEnabled, putValue, removePropertyChangeListener, setEnabled

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CreateExonAction

public CreateExonAction(java.lang.String name,
                        GuiCurationState curationState,
                        AnnotationEditor annotationEditor)

Constructor

Parameters:

name - the name of this action

curationState - the curation state

annotationEditor - the annotation editor

Method Detail

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent e)

Performs the insertion

setFeature

public void setFeature(SeqFeatureI feature)

Sets what feature the exon will be added to

Parameters:

feature -

setSelectedBasePair

public void setSelectedBasePair(int basepair)

Sets the location of the one base exon

Parameters:

basepair - genomic coordinates The base pair should be within an intron region for the feature