apollo.dataadapter
Class ChromosomeAdapter

java.lang.Object
  apollo.dataadapter.ChromosomeAdapter

public class ChromosomeAdapter
extends java.lang.Object

Field Summary

protected static org.apache.log4j.Logger

logger

Constructor Summary

ChromosomeAdapter()

ChromosomeAdapter(java.lang.String filename)

Method Summary

Karyotype	getKaryotypeBySpeciesName(java.lang.String name)
java.util.Vector	getKaryotypes()
java.lang.String	getName()
java.lang.String	getType()
void	init()
static void	main(java.lang.String[] args)
java.util.Vector	parse_data()
void	setFilename(java.lang.String filename)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

logger

protected static final org.apache.log4j.Logger logger

Constructor Detail

ChromosomeAdapter

public ChromosomeAdapter(java.lang.String filename)

ChromosomeAdapter

public ChromosomeAdapter()

Method Detail

init

public void init()

getName

public java.lang.String getName()

getType

public java.lang.String getType()

setFilename

public void setFilename(java.lang.String filename)

getKaryotypes

public java.util.Vector getKaryotypes()

getKaryotypeBySpeciesName

public Karyotype getKaryotypeBySpeciesName(java.lang.String name)

parse_data

public java.util.Vector parse_data()
                            throws ApolloAdapterException

Throws:

ApolloAdapterException

main

public static void main(java.lang.String[] args)